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Edn1 endothelin 1 [ Cavia porcellus (domestic guinea pig) ]

Gene ID: 100726197, updated on 8-Mar-2024

Summary

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Gene symbol
Edn1
Gene description
endothelin 1
See related
Ensembl:ENSCPOG00000032724
Gene type
protein coding
RefSeq status
MODEL
Organism
Cavia porcellus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
Orthologs
human mouse all
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Genomic context

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See Edn1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947496.1 (17000149..17006606)
103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176381.1 (8146004..8152565)

NW_026947496.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106027442 Neighboring gene HIVEP zinc finger 1 Neighboring gene uncharacterized LOC134478499 Neighboring gene nuclear receptor coactivator 6-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables endothelin A receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables endothelin B receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hormone activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular calcium ion homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of prostaglandin-endoperoxide synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of systemic arterial blood pressure by endothelin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of vasoconstriction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vein smooth muscle contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
endothelin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCavPor4.1

Genomic

  1. NW_026947496.1 Reference mCavPor4.1

    Range
    17000149..17006606
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003468843.5 → XP_003468891.2  endothelin-1

    UniProtKB/TrEMBL
    A0A286XTW8
    Related
    ENSCPOP00000028977.1
    Conserved Domains (2) summary
    smart00272
    Location:115 → 136
    END; Endothelin
    pfam00322
    Location:55 → 83
    Endothelin; Endothelin family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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