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Ctla4 cytotoxic T-lymphocyte associated protein 4 [ Cavia porcellus (domestic guinea pig) ]

Gene ID: 100725760, updated on 8-Mar-2024

Summary

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Gene symbol
Ctla4
Gene description
cytotoxic T-lymphocyte associated protein 4
See related
Ensembl:ENSCPOG00000019534
Gene type
protein coding
RefSeq status
MODEL
Organism
Cavia porcellus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
Orthologs
human mouse all
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Genomic context

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See Ctla4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947509.1 (42439358..42445410)
103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176406.1 (37714638..37720573)

NW_026947509.1Genomic Context describing neighboring genes Neighboring gene CD28 molecule Neighboring gene uncharacterized LOC134473298 Neighboring gene inducible T cell costimulator Neighboring gene uncharacterized LOC134473146

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in B cell receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in T cell receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of regulatory T cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of T cell proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytotoxic T-lymphocyte protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCavPor4.1

Genomic

  1. NW_026947509.1 Reference mCavPor4.1

    Range
    42439358..42445410
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003474180.4 → XP_003474228.1  cytotoxic T-lymphocyte protein 4

    UniProtKB/TrEMBL
    H0VUB1
    Related
    ENSCPOP00000014284.1
    Conserved Domains (2) summary
    smart00410
    Location:105 → 151
    IG_like; Immunoglobulin like
    cl11960
    Location:39 → 152
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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