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Dhx30 DExH-box helicase 30 [ Cavia porcellus (domestic guinea pig) ]

Gene ID: 100724876, updated on 8-Mar-2024

Summary

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Gene symbol
Dhx30
Gene description
DExH-box helicase 30
See related
Ensembl:ENSCPOG00000000699
Gene type
protein coding
RefSeq status
MODEL
Organism
Cavia porcellus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
Orthologs
human mouse all
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Genomic context

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See Dhx30 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947497.1 (64786735..64812949)
103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176412.1 (48154589..48180691)

NW_026947497.1Genomic Context describing neighboring genes Neighboring gene chondroitin sulfate proteoglycan 5 Neighboring gene SWI/SNF related BAF chromatin remodeling complex subunit C1 Neighboring gene small nucleolar RNA SNORA2/SNORA34 family Neighboring gene microtubule associated protein 4 Neighboring gene uncharacterized LOC134478746 Neighboring gene 5S ribosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular anatomical structure IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-dependent RNA helicase DHX30
Names
DEAH (Asp-Glu-Ala-His) box polypeptide 30
DEAH-box helicase 30

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCavPor4.1

Genomic

  1. NW_026947497.1 Reference mCavPor4.1

    Range
    64786735..64812949
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003476906.4 → XP_003476954.3  ATP-dependent RNA helicase DHX30 isoform X2

  2. XM_023560246.2 → XP_023416014.2  ATP-dependent RNA helicase DHX30 isoform X2

  3. XM_005006850.4 → XP_005006907.2  ATP-dependent RNA helicase DHX30 isoform X1

RNA

  1. XR_010051602.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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