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Ttl tubulin tyrosine ligase [ Cavia porcellus (domestic guinea pig) ]

Gene ID: 100723990, updated on 8-Mar-2024

Summary

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Gene symbol
Ttl
Gene description
tubulin tyrosine ligase
See related
Ensembl:ENSCPOG00000034200
Gene type
protein coding
RefSeq status
MODEL
Organism
Cavia porcellus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
Orthologs
human mouse all
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Genomic context

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See Ttl in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947501.1 (56147704..56175114)
103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176346.1 (6828069..6855463, complement)

NW_026947501.1Genomic Context describing neighboring genes Neighboring gene zinc finger CCCH-type containing 6 Neighboring gene uncharacterized LOC134471456 Neighboring gene RNA polymerase I subunit B Neighboring gene coiled-coil-helix-coiled-coil-helix domain containing 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tubulin-tyrosine ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein modification process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in spindle microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tubulin--tyrosine ligase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCavPor4.1

Genomic

  1. NW_026947501.1 Reference mCavPor4.1

    Range
    56147704..56175114
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013147380.3 → XP_013002834.2  tubulin--tyrosine ligase isoform X1

  2. XM_013147381.3 → XP_013002835.1  tubulin--tyrosine ligase isoform X2

    Conserved Domains (1) summary
    pfam03133
    Location:81 → 390
    TTL; Tubulin-tyrosine ligase family

  3. XM_003465061.5 → XP_003465109.1  tubulin--tyrosine ligase isoform X3

    UniProtKB/TrEMBL
    A0A286XCC5
    Related
    ENSCPOP00000023096.1
    Conserved Domains (1) summary
    pfam03133
    Location:81 → 367
    TTL; Tubulin-tyrosine ligase family
Nucleotide Protein
Heading Accession and Version

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