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Iars1 isoleucyl-tRNA synthetase 1 [ Cavia porcellus (domestic guinea pig) ]

Gene ID: 100723914, updated on 8-Mar-2024

Summary

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Gene symbol
Iars1
Gene description
isoleucyl-tRNA synthetase 1
See related
Ensembl:ENSCPOG00000000819
Gene type
protein coding
RefSeq status
MODEL
Organism
Cavia porcellus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
Also known as
Iars
Orthologs
human mouse all
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Genomic context

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See Iars1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
35
Annotation release Status Assembly Chr Location
RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947500.1 (19417814..19483144)
103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176377.1 (1354878..1420038)

NW_026947500.1Genomic Context describing neighboring genes Neighboring gene centromere protein P Neighboring gene U6 spliceosomal RNA Neighboring gene small nucleolar RNA SNORA84 Neighboring gene nucleolar protein 8 Neighboring gene spermatogenesis-associated protein 31A3-like Neighboring gene F-box and WD repeat domain containing 12

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables aminoacyl-tRNA editing activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables isoleucine-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables tRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in isoleucyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
isoleucine--tRNA ligase, cytoplasmic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mCavPor4.1

Genomic

  1. NW_026947500.1 Reference mCavPor4.1

    Range
    19417814..19483144
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003468386.5 → XP_003468434.3  isoleucine--tRNA ligase, cytoplasmic isoform X1

  2. XM_013150670.3 → XP_013006124.2  isoleucine--tRNA ligase, cytoplasmic isoform X1

  3. XM_023564369.2 → XP_023420137.2  isoleucine--tRNA ligase, cytoplasmic isoform X2

  4. XM_063227339.1 → XP_063083409.1  isoleucine--tRNA ligase, cytoplasmic isoform X3

Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases
Research Materials