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dnajb6a DnaJ heat shock protein family (Hsp40) member B6a [ Oreochromis niloticus (Nile tilapia) ]

Gene ID: 100708567, updated on 8-Mar-2024

Summary

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Gene symbol
dnajb6a
Gene description
DnaJ heat shock protein family (Hsp40) member B6a
See related
Ensembl:ENSONIG00000006353
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
Expression
Broad expression in ovary (RPKM 46.4), testis (RPKM 38.6) and 6 other tissues See more
Orthologs
zebrafish all
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Genomic context

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See dnajb6a in Genome Data Viewer
Location:
chromosome: LG18
Exon count:
8
Annotation release Status Assembly LG Location
104 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG18 NC_031982.2 (288716..297164)
103 previous assembly ASM185804v2 (GCF_001858045.1) LG18 NC_031982.1 (1654355..1662789)

Linkage Group LG18 - NC_031982.2Genomic Context describing neighboring genes Neighboring gene glutamate decarboxylase 3 Neighboring gene exocyst complex component 3 Neighboring gene potassium voltage-gated channel subfamily B member 2 Neighboring gene uncharacterized LOC112842896

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Oreochromis niloticus Transcriptome or Gene expression Oreochromis niloticus Transcriptome or Gene expression
  • Description: Oreochromis niloticus (Nile Tilapia) RNA sequencing from multiple tissues.
  • BioProject: PRJNA78915
  • Analysis date: Fri Dec 29 00:23:36 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables Hsp70 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chaperone-mediated protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein refolding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dnaJ homolog subfamily B member 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oreochromis niloticus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference O_niloticus_UMD_NMBU Primary Assembly

Genomic

  1. NC_031982.2 Reference O_niloticus_UMD_NMBU Primary Assembly

    Range
    288716..297164
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003456726.4 → XP_003456774.1  dnaJ homolog subfamily B member 6

    UniProtKB/TrEMBL
    I3JGL8
    Related
    ENSONIP00000008009.2, ENSONIT00000008014.2
    Conserved Domains (1) summary
    pfam00226
    Location:3 → 66
    DnaJ; DnaJ domain
Nucleotide Protein
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