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dnajb6b DnaJ heat shock protein family (Hsp40) member B6b [ Oreochromis niloticus (Nile tilapia) ]

Gene ID: 100707780, updated on 8-Mar-2024

Summary

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Gene symbol
dnajb6b
Gene description
DnaJ heat shock protein family (Hsp40) member B6b
See related
Ensembl:ENSONIG00000005984
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
Also known as
dnajb6
Orthologs
human zebrafish all
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Genomic context

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See dnajb6b in Genome Data Viewer
Location:
chromosome: LG9
Exon count:
10
Annotation release Status Assembly LG Location
104 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG9 NC_031974.2 (16589172..16617850, complement)
103 previous assembly ASM185804v2 (GCF_001858045.1) LG9 NC_031974.1 (14911222..14939900, complement)

Linkage Group LG9 - NC_031974.2Genomic Context describing neighboring genes Neighboring gene non-SMC condensin II complex, subunit G2 Neighboring gene protein tyrosine phosphatase receptor type N2 Neighboring gene uncharacterized LOC112847811 Neighboring gene ubiquitin protein ligase E3C Neighboring gene motor neuron and pancreas homeobox 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables Hsp70 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chaperone-mediated protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein refolding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dnaJ homolog subfamily B member 6
Names
DnaJ heat shock protein family (Hsp40) member B6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oreochromis niloticus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference O_niloticus_UMD_NMBU Primary Assembly

Genomic

  1. NC_031974.2 Reference O_niloticus_UMD_NMBU Primary Assembly

    Range
    16589172..16617850 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003439225.4 → XP_003439273.2  dnaJ homolog subfamily B member 6 isoform X1

    UniProtKB/TrEMBL
    I3JF95
    Related
    ENSONIP00000007536.2, ENSONIT00000007541.2
    Conserved Domains (1) summary
    pfam00226
    Location:3 → 66
    DnaJ; DnaJ domain

  2. XM_013277502.3 → XP_013132956.1  dnaJ homolog subfamily B member 6 isoform X2

    Conserved Domains (1) summary
    pfam00226
    Location:3 → 66
    DnaJ; DnaJ domain
Nucleotide Protein
Heading Accession and Version

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