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mpdu1b mannose-P-dolichol utilization defect 1b [ Oreochromis niloticus (Nile tilapia) ]

Gene ID: 100696236, updated on 8-Mar-2024

Summary

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Gene symbol
mpdu1b
Gene description
mannose-P-dolichol utilization defect 1b
See related
Ensembl:ENSONIG00000000598
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
Also known as
mpdu1
Orthologs
human zebrafish all
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Genomic context

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See mpdu1b in Genome Data Viewer
Location:
chromosome: LG3
Exon count:
7
Annotation release Status Assembly LG Location
104 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG3 NC_031967.2 (1670728..1677903, complement)
103 previous assembly ASM185804v2 (GCF_001858045.1) LG3a NC_031967.1 (8486993..8494172, complement)

Linkage Group LG3 - NC_031967.2Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORD10 Neighboring gene eukaryotic translation initiation factor 4A1A Neighboring gene SRY-box transcription factor 19b Neighboring gene metallo-beta-lactamase domain containing 1 Neighboring gene lysophosphatidic acid receptor 6

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in oligosaccharide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mannose-P-dolichol utilization defect 1 protein
Names
mannose-P-dolichol utilization defect 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oreochromis niloticus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference O_niloticus_UMD_NMBU Primary Assembly

Genomic

  1. NC_031967.2 Reference O_niloticus_UMD_NMBU Primary Assembly

    Range
    1670728..1677903 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003458926.5 → XP_003458974.1  mannose-P-dolichol utilization defect 1 protein

    UniProtKB/TrEMBL
    I3IVW7
    Related
    ENSONIP00000000757.1, ENSONIT00000000756.2
    Conserved Domains (2) summary
    TIGR00951
    Location:48 → 243
    2A43; Lysosomal Cystine Transporter
    pfam04193
    Location:51 → 109
    PQ-loop; PQ loop repeat
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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