U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ugt8 UDP glycosyltransferase 8 [ Oreochromis niloticus (Nile tilapia) ]

Gene ID: 100696128, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
ugt8
Gene description
UDP glycosyltransferase 8
See related
Ensembl:ENSONIG00000014598
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
Expression
Broad expression in brain (RPKM 9.4), kidney (RPKM 5.4) and 7 other tissues See more
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See ugt8 in Genome Data Viewer
Location:
chromosome: LG6
Exon count:
8
Annotation release Status Assembly LG Location
104 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG6 NC_031971.2 (21015585..21041096, complement)
103 previous assembly ASM185804v2 (GCF_001858045.1) LG6 NC_031971.1 (19831927..19858065)

Linkage Group LG6 - NC_031971.2Genomic Context describing neighboring genes Neighboring gene serine protease 12 Neighboring gene N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 Neighboring gene uncharacterized LOC112847114 Neighboring gene uncharacterized LOC106098903 Neighboring gene SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 Neighboring gene choline transporter-like protein 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Oreochromis niloticus Transcriptome or Gene expression Oreochromis niloticus Transcriptome or Gene expression
  • Description: Oreochromis niloticus (Nile Tilapia) RNA sequencing from multiple tissues.
  • BioProject: PRJNA78915
  • Analysis date: Fri Dec 29 00:23:36 2017

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
2-hydroxyacylsphingosine 1-beta-galactosyltransferase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Oreochromis niloticus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference O_niloticus_UMD_NMBU Primary Assembly

Genomic

  1. NC_031971.2 Reference O_niloticus_UMD_NMBU Primary Assembly

    Range
    21015585..21041096 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003454234.5 → XP_003454282.3  2-hydroxyacylsphingosine 1-beta-galactosyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A669E1K9
    Related
    ENSONIP00000066925.1, ENSONIT00000069394.1
    Conserved Domains (1) summary
    cl26154
    Location:72 → 541
    UDPGT; UDP-glucoronosyl and UDP-glucosyl transferase

  2. XM_005458742.4 → XP_005458799.1  2-hydroxyacylsphingosine 1-beta-galactosyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A669E1K9, I3KB76
    Related
    ENSONIP00000018371.2, ENSONIT00000018388.2
    Conserved Domains (2) summary
    PHA03392
    Location:262 → 489
    egt; ecdysteroid UDP-glucosyltransferase; Provisional
    pfam00201
    Location:31 → 500
    UDPGT; UDP-glucoronosyl and UDP-glucosyl transferase

  3. XM_025907725.1 → XP_025763510.1  2-hydroxyacylsphingosine 1-beta-galactosyltransferase isoform X3

    UniProtKB/TrEMBL
    A0A669E1K9
    Conserved Domains (1) summary
    cl26154
    Location:24 → 493
    UDPGT; UDP-glucoronosyl and UDP-glucosyl transferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.