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LOC100692828 UDP-glucuronosyltransferase 2A1 [ Oreochromis niloticus (Nile tilapia) ]

Gene ID: 100692828, updated on 21-Dec-2023

Summary

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Gene symbol
LOC100692828
Gene description
UDP-glucuronosyltransferase 2A1
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
Expression
Broad expression in kidney (RPKM 16.8), ovary (RPKM 13.3) and 8 other tissues See more
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Genomic context

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See LOC100692828 in Genome Data Viewer
Location:
chromosome: LG12
Exon count:
14
Annotation release Status Assembly LG Location
104 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG12 NC_031977.2 (28789980..28804157, complement)
103 previous assembly ASM185804v2 (GCF_001858045.1) LG12 NC_031977.1 (32951861..32986022, complement)

Linkage Group LG12 - NC_031977.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109204530 Neighboring gene UDP-glucuronosyltransferase 2A2 Neighboring gene uncharacterized LOC112841802 Neighboring gene UDP-glucuronosyltransferase 2A1-like Neighboring gene uncharacterized LOC112841805 Neighboring gene uncharacterized LOC112841803 Neighboring gene T-cell acute lymphocytic leukemia 2 Neighboring gene shortage in chiasmata 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Oreochromis niloticus Transcriptome or Gene expression Oreochromis niloticus Transcriptome or Gene expression
  • Description: Oreochromis niloticus (Nile Tilapia) RNA sequencing from multiple tissues.
  • BioProject: PRJNA78915
  • Analysis date: Fri Dec 29 00:23:36 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-glucuronosyltransferase 2A1; UDP-glucuronosyltransferase 2A2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oreochromis niloticus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference O_niloticus_UMD_NMBU Primary Assembly

Genomic

  1. NC_031977.2 Reference O_niloticus_UMD_NMBU Primary Assembly

    Range
    28789980..28804157 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019365531.2 → XP_019221076.1  UDP-glucuronosyltransferase 2A1 isoform X1

    UniProtKB/TrEMBL
    A0A669B9N9

  2. XM_019365537.2 → XP_019221082.1  UDP-glucuronosyltransferase 2A1 isoform X4

    UniProtKB/TrEMBL
    A0A669C0H6

  3. XM_025896947.1 → XP_025752732.1  UDP-glucuronosyltransferase 2A1 isoform X5

    Conserved Domains (1) summary
    pfam00201
    Location:239 → 733
    UDPGT; UDP-glucoronosyl and UDP-glucosyl transferase

  4. XM_019365534.2 → XP_019221079.1  UDP-glucuronosyltransferase 2A1 isoform X2

    UniProtKB/TrEMBL
    A0A669DJL3

  5. XM_003454139.4 → XP_003454187.1  UDP-glucuronosyltransferase 2A2 isoform X3

    UniProtKB/TrEMBL
    A0A669CAG5
    Conserved Domains (2) summary
    PHA03392
    Location:8 → 500
    egt; ecdysteroid UDP-glucosyltransferase; Provisional
    pfam00201
    Location:22 → 523
    UDPGT; UDP-glucoronosyl and UDP-glucosyl transferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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