U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

large2 LARGE xylosyl- and glucuronyltransferase 2 [ Oreochromis niloticus (Nile tilapia) ]

Gene ID: 100690862, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
large2
Gene description
LARGE xylosyl- and glucuronyltransferase 2
See related
Ensembl:ENSONIG00000015607
Gene type
protein coding
RefSeq status
MODEL
Organism
Oreochromis niloticus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Oreochromini; Oreochromis
Expression
Broad expression in brain (RPKM 8.5), kidney (RPKM 4.5) and 6 other tissues See more
Orthologs
zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See large2 in Genome Data Viewer
Location:
chromosome: LG1
Exon count:
18
Annotation release Status Assembly LG Location
104 current O_niloticus_UMD_NMBU (GCF_001858045.2) LG1 NC_031965.2 (2084970..2204284, complement)
103 previous assembly ASM185804v2 (GCF_001858045.1) LG1 NC_031965.1 (31634..150960, complement)

Linkage Group LG1 - NC_031965.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109204449 Neighboring gene uncharacterized LOC102075536 Neighboring gene extensin-1-like Neighboring gene uncharacterized LOC112847401 Neighboring gene uncharacterized LOC109203590

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Oreochromis niloticus Transcriptome or Gene expression Oreochromis niloticus Transcriptome or Gene expression
  • Description: Oreochromis niloticus (Nile Tilapia) RNA sequencing from multiple tissues.
  • BioProject: PRJNA78915
  • Analysis date: Fri Dec 29 00:23:36 2017

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
LARGE xylosyl- and glucuronyltransferase 2
Names
glycosyltransferase-like protein LARGE2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Oreochromis niloticus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference O_niloticus_UMD_NMBU Primary Assembly

Genomic

  1. NC_031965.2 Reference O_niloticus_UMD_NMBU Primary Assembly

    Range
    2084970..2204284 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025907450.1 → XP_025763235.1  LARGE xylosyl- and glucuronyltransferase 2

    UniProtKB/TrEMBL
    I3KEU3
    Conserved Domains (2) summary
    cd06431
    Location:132 → 411
    GT8_LARGE_C; LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis
    pfam13896
    Location:467 → 736
    Glyco_transf_49; Glycosyl-transferase for dystroglycan

  2. XM_005457380.4 → XP_005457437.1  LARGE xylosyl- and glucuronyltransferase 2

    See identical proteins and their annotated locations for XP_005457437.1

    UniProtKB/TrEMBL
    I3KEU3
    Related
    ENSONIP00000019638.2, ENSONIT00000019655.2
    Conserved Domains (2) summary
    cd06431
    Location:132 → 411
    GT8_LARGE_C; LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis
    pfam13896
    Location:467 → 736
    Glyco_transf_49; Glycosyl-transferase for dystroglycan

  3. XM_005457381.4 → XP_005457438.1  LARGE xylosyl- and glucuronyltransferase 2

    See identical proteins and their annotated locations for XP_005457438.1

    UniProtKB/TrEMBL
    I3KEU3
    Related
    ENSONIP00000019639.2, ENSONIT00000019656.2
    Conserved Domains (2) summary
    cd06431
    Location:132 → 411
    GT8_LARGE_C; LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis
    pfam13896
    Location:467 → 736
    Glyco_transf_49; Glycosyl-transferase for dystroglycan

  4. XM_025907436.1 → XP_025763221.1  LARGE xylosyl- and glucuronyltransferase 2

    UniProtKB/TrEMBL
    I3KEU3
    Related
    ENSONIP00000063424.1, ENSONIT00000084076.1
    Conserved Domains (2) summary
    cd06431
    Location:132 → 411
    GT8_LARGE_C; LARGE catalytic domain has closest homology to GT8 glycosyltransferase involved in lipooligosaccharide synthesis
    pfam13896
    Location:467 → 736
    Glyco_transf_49; Glycosyl-transferase for dystroglycan
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.