U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Cert1 ceramide transporter 1 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100689038, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Cert1
Gene description
ceramide transporter 1
Locus tag
I79_015811
See related
Ensembl:ENSCGRG00015009810
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Also known as
Cert; Col4a3bp
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Cert1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
18
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614466.1 (583779..682962, complement)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 2 NC_048595.1 (315224335..315319927)

NW_003614466.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain 31 Neighboring gene 3-hydroxy-3-methylglutaryl-CoA reductase Neighboring gene DNA polymerase kappa

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Molecular machinery for non-vesicular trafficking of ceramide. Hanada K, et al. Nature, 2003 Dec 18. PMID 14685229
  2. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-4-phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ER to Golgi ceramide transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
ceramide transfer protein
Names
Ceramide transfer protein
Collagen type IV alpha-3-binding protein
collagen type IV alpha 3 binding protein
collagen, type IV, alpha 3 (Goodpasture antigen) binding protein
lipid-transfer protein CERT
NP_001230955.1
XP_007646800.1
XP_035315401.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001244026.1 → NP_001230955.1  ceramide transfer protein

    See identical proteins and their annotated locations for NP_001230955.1

    Status: PROVISIONAL

    Source sequence(s)
    AY323814
    UniProtKB/TrEMBL
    Q6VVX1
    Related
    ENSCGRP00015012956.1, ENSCGRT00015015853.2
    Conserved Domains (2) summary
    cd08872
    Location:391 → 624
    START_STARD11-like; Ceramide-binding START domain of mammalian STARD11 and related domains
    cd13283
    Location:26 → 125
    PH_GPBP; Goodpasture antigen binding protein Pleckstrin homology (PH) domain

RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614466.1 Reference CriGri_1.0 Primary Assembly

    Range
    583779..682962 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035459510.1 → XP_035315401.1  ceramide transfer protein isoform X2

    Conserved Domains (2) summary
    cd13283
    Location:26 → 125
    PH_GPBP; Goodpasture antigen binding protein Pleckstrin homology (PH) domain
    cl14643
    Location:364 → 557
    SRPBCC; START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily

  2. XM_007648610.2 → XP_007646800.1  ceramide transfer protein isoform X1

    See identical proteins and their annotated locations for XP_007646800.1

    UniProtKB/Swiss-Prot
    Q6VVX2
    Conserved Domains (2) summary
    cd08872
    Location:364 → 598
    START_STARD11-like; Ceramide-binding START domain of mammalian STARD11 and related domains
    cd13283
    Location:26 → 125
    PH_GPBP; Goodpasture antigen binding protein Pleckstrin homology (PH) domain

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048595.1 Alternate CriGri-PICRH-1.0

    Range
    315224335..315319927
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6VVX2.1 GenPept UniProtKB/Swiss-Prot:Q6VVX2

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.