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Fut9 fucosyltransferase 9 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100689036, updated on 8-Mar-2024

Summary

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Gene symbol
Fut9
Gene description
fucosyltransferase 9
Locus tag
I79_018258
See related
Ensembl:ENSCGRG00015040511
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Also known as
Fuc-TIX; FucT-IX
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See Fut9 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614811.1 (441347..443418)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 2 NC_048595.1 (116109064..116111135)

NW_003614811.1Genomic Context describing neighboring genes Neighboring gene integral membrane protein 2C-like Neighboring gene U2 spliceosomal RNA Neighboring gene ADP-ribosylation factor-related protein 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. alpha(1,3)fucosyltransferases expressed by the gain-of-function Chinese hamster ovary glycosylation mutants LEC12, LEC29, and LEC30. Patnaik SK, et al. Arch Biochem Biophys, 2000 Mar 15. PMID 10700388
  2. LEC12 and LEC29 gain-of-function Chinese hamster ovary mutants reveal mechanisms for regulating VIM-2 antigen synthesis and E-selectin binding. Patnaik SK, et al. J Biol Chem, 2004 Nov 26. PMID 15364956
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-(1->3)-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9
Names
Fucosyltransferase IX
Galactoside 3-L-fucosyltransferase
alpha (1,3) fucosyltransferase type IX
alpha-(1,3)-fucosyltransferase 9
fucosyltransferase 9 (alpha (1,3) fucosyltransferase)
NP_001230953.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001244024.1 → NP_001230953.1  4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase 9

    See identical proteins and their annotated locations for NP_001230953.1

    Status: PROVISIONAL

    Source sequence(s)
    AY628212
    UniProtKB/Swiss-Prot
    Q9JIG1
    UniProtKB/TrEMBL
    G3I481
    Related
    ENSCGRP00015058682.1, ENSCGRT00015057520.1
    Conserved Domains (2) summary
    pfam00852
    Location:185 → 354
    Glyco_transf_10; Glycosyltransferase family 10 (fucosyltransferase) C-term
    pfam17039
    Location:62 → 169
    Glyco_tran_10_N; Fucosyltransferase, N-terminal

RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614811.1 Reference CriGri_1.0 Primary Assembly

    Range
    441347..443418
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048595.1 Alternate CriGri-PICRH-1.0

    Range
    116109064..116111135
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9JIG1.1 GenPept UniProtKB/Swiss-Prot:Q9JIG1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials