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MED7 mediator complex subunit 7 [ Canis lupus familiaris (dog) ]

Gene ID: 100688348, updated on 17-Aug-2024

Summary

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Official Symbol
MED7provided by VGNC
Official Full Name
mediator complex subunit 7provided by VGNC
Primary source
VGNC:VGNC:43141
See related
Ensembl:ENSCAFG00845002415
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
CRSP9
Orthologs
human mouse all
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Genomic context

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See MED7 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
6
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 4 NC_051808.1 (53435333..53440656)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 4 NC_006586.4 (52890948..52896263)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 4 NC_049225.1 (53885525..53890848)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 4 NC_049264.1 (53261661..53266974)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 4 NC_049745.1 (53368614..53373965)

Chromosome 4 - NC_051808.1Genomic Context describing neighboring genes Neighboring gene IL2 inducible T cell kinase Neighboring gene golgi associated RAB2B interactor family member 3 Neighboring gene hepatitis A virus cellular receptor 2 Neighboring gene hepatitis A virus cellular receptor 1 Neighboring gene U4 spliceosomal RNA Neighboring gene T cell immunoglobulin and mucin domain containing 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mediator of RNA polymerase II transcription subunit 7
Names
cofactor required for Sp1 transcriptional activation, subunit 9, 33kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001253899.2 → NP_001240828.1  mediator of RNA polymerase II transcription subunit 7

    See identical proteins and their annotated locations for NP_001240828.1

    Status: VALIDATED

    Source sequence(s)
    JAAUVH010000355
    UniProtKB/TrEMBL
    A0A8C0LHY7, A0A8C0RGW9, A0A8I3MG00
    Related
    ENSCAFP00845003394.1, ENSCAFT00845004252.1
    Conserved Domains (1) summary
    pfam05983
    Location:7 → 164
    Med7; MED7 protein

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051808.1 Reference ROS_Cfam_1.0

    Range
    53435333..53440656
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038662194.1 → XP_038518122.1  mediator of RNA polymerase II transcription subunit 7 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LHY7, A0A8C0RGW9, A0A8I3MG00
    Conserved Domains (1) summary
    pfam05983
    Location:7 → 164
    Med7; MED7 protein

  2. XM_038662193.1 → XP_038518121.1  mediator of RNA polymerase II transcription subunit 7 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LHY7, A0A8C0RGW9, A0A8I3MG00
    Related
    ENSCAFP00845003397.1, ENSCAFT00845004255.1
    Conserved Domains (1) summary
    pfam05983
    Location:7 → 164
    Med7; MED7 protein

  3. XM_038662192.1 → XP_038518120.1  mediator of RNA polymerase II transcription subunit 7 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LHY7, A0A8C0RGW9, A0A8I3MG00
    Conserved Domains (1) summary
    pfam05983
    Location:7 → 164
    Med7; MED7 protein

  4. XM_038662191.1 → XP_038518119.1  mediator of RNA polymerase II transcription subunit 7 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LHY7, A0A8C0RGW9, A0A8I3MG00
    Related
    ENSCAFP00845003398.1, ENSCAFT00845004256.1
    Conserved Domains (1) summary
    pfam05983
    Location:7 → 164
    Med7; MED7 protein

  5. XM_038662195.1 → XP_038518123.1  mediator of RNA polymerase II transcription subunit 7 isoform X1

    UniProtKB/TrEMBL
    A0A8C0LHY7, A0A8C0RGW9, A0A8I3MG00
    Conserved Domains (1) summary
    pfam05983
    Location:7 → 164
    Med7; MED7 protein

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049264.1 Alternate UMICH_Zoey_3.1

    Range
    53261661..53266974
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049745.1 Alternate UNSW_CanFamBas_1.0

    Range
    53368614..53373965
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049225.1 Alternate UU_Cfam_GSD_1.0

    Range
    53885525..53890848
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006586.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    52890948..52896263
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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