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LOC100683883 dnaJ homolog subfamily B member 6-like [ Canis lupus familiaris (dog) ]

Gene ID: 100683883, updated on 25-Jan-2024

Summary

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Gene symbol
LOC100683883
Gene description
dnaJ homolog subfamily B member 6-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
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Genomic context

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See LOC100683883 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
2
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 22 NC_051826.1 (9003486..9004408, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 22 NC_006604.4 (8771739..8772661, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 22 NC_049243.1 (8758499..8759421, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 22 NC_049282.1 (8696355..8697277, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 22 NC_049763.1 (8746675..8747597, complement)

Chromosome 22 - NC_051826.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119865190 Neighboring gene diacylglycerol kinase eta Neighboring gene uncharacterized LOC119865126 Neighboring gene von Willebrand factor A domain containing 8 Neighboring gene uncharacterized LOC102152721 Neighboring gene uncharacterized LOC119865191 Neighboring gene small nucleolar RNA U3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables Hsp70 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chaperone-mediated protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein refolding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: dnaJ homolog subfamily B member 6-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051826.1 Reference ROS_Cfam_1.0

    Range
    9003486..9004408 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038430800.1 → XP_038286728.1  LOW QUALITY PROTEIN: dnaJ homolog subfamily B member 6-like

    UniProtKB/TrEMBL
    A0A8C0L1U5, A0A8I3N9H3, A0A8P0PJI9
    Conserved Domains (1) summary
    PRK10767
    Location:3 → 133
    PRK10767; chaperone protein DnaJ; Provisional

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049282.1 Alternate UMICH_Zoey_3.1

    Range
    8696355..8697277 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038506957.1 → XP_038362885.1  LOW QUALITY PROTEIN: dnaJ homolog subfamily B member 6-like

    Conserved Domains (1) summary
    PRK10767
    Location:3 → 133
    PRK10767; chaperone protein DnaJ; Provisional

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049763.1 Alternate UNSW_CanFamBas_1.0

    Range
    8746675..8747597 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038633536.1 → XP_038489464.1  LOW QUALITY PROTEIN: dnaJ homolog subfamily B member 6-like

    Conserved Domains (1) summary
    PRK10767
    Location:3 → 133
    PRK10767; chaperone protein DnaJ; Provisional

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049243.1 Alternate UU_Cfam_GSD_1.0

    Range
    8758499..8759421 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038569369.1 → XP_038425297.1  LOW QUALITY PROTEIN: dnaJ homolog subfamily B member 6-like

    UniProtKB/TrEMBL
    A0A8C0L1U5, A0A8I3N9H3, A0A8P0PJI9
    Conserved Domains (1) summary
    PRK10767
    Location:3 → 133
    PRK10767; chaperone protein DnaJ; Provisional

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006604.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    8771739..8772661 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038456854.1 → XP_038312782.1  LOW QUALITY PROTEIN: dnaJ homolog subfamily B member 6-like

    UniProtKB/TrEMBL
    A0A8C0L1U5, A0A8I3N9H3, A0A8P0PJI9
    Conserved Domains (1) summary
    PRK10767
    Location:3 → 133
    PRK10767; chaperone protein DnaJ; Provisional
Nucleotide Protein
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