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KRT77 keratin 77 [ Canis lupus familiaris (dog) ]

Gene ID: 100683333, updated on 8-Mar-2024

Summary

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Gene symbol
KRT77
Gene description
keratin 77
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See KRT77 in Genome Data Viewer
Location:
chromosome: 27
Exon count:
9
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 27 NC_051831.1 (2399788..2413636)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 27 NC_006609.4 (43840171..43853691, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 27 NC_049248.1 (44238610..44252170, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 27 NC_049287.1 (2416266..2430027)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 27 NC_049768.1 (2401213..2415050)

Chromosome 27 - NC_051831.1Genomic Context describing neighboring genes Neighboring gene keratin 127 Neighboring gene keratin, type II cytoskeletal 3-like Neighboring gene keratin 1 Neighboring gene keratin 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of skin epidermis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intermediate filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in keratinization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in keratin filament IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
keratin, type II cytoskeletal 1b

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051831.1 Reference ROS_Cfam_1.0

    Range
    2399788..2413636
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038438105.1 → XP_038294033.1  keratin, type II cytoskeletal 1b isoform X1

    UniProtKB/TrEMBL
    A0A8C0TJK6
    Conserved Domains (2) summary
    pfam00038
    Location:175 → 488
    Filament; Intermediate filament protein
    pfam16208
    Location:61 → 172
    Keratin_2_head; Keratin type II head

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049287.1 Alternate UMICH_Zoey_3.1

    Range
    2416266..2430027
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038512797.1 → XP_038368725.1  keratin, type II cytoskeletal 1b isoform X1

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049768.1 Alternate UNSW_CanFamBas_1.0

    Range
    2401213..2415050
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038640560.1 → XP_038496488.1  keratin, type II cytoskeletal 1b isoform X1

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049248.1 Alternate UU_Cfam_GSD_1.0

    Range
    44238610..44252170 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038577741.1 → XP_038433669.1  keratin, type II cytoskeletal 1b isoform X1

    UniProtKB/TrEMBL
    A0A8C0LBX1

  2. XM_038577742.1 → XP_038433670.1  keratin, type II cytoskeletal 1b isoform X2

    UniProtKB/TrEMBL
    A0A8C0TJK6

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006609.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    43840171..43853691 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038460142.1 → XP_038316070.1  keratin, type II cytoskeletal 1b isoform X3

    UniProtKB/TrEMBL
    A0A8C0TJK6
    Conserved Domains (2) summary
    pfam00038
    Location:175 → 488
    Filament; Intermediate filament protein
    pfam16208
    Location:61 → 172
    Keratin_2_head; Keratin type II head

  2. XM_038460141.1 → XP_038316069.1  keratin, type II cytoskeletal 1b isoform X1

    UniProtKB/TrEMBL
    A0A8C0LBX1, A0A8P0TIA1
    Conserved Domains (2) summary
    pfam00038
    Location:175 → 488
    Filament; Intermediate filament protein
    pfam16208
    Location:61 → 172
    Keratin_2_head; Keratin type II head
Nucleotide Protein
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