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GFRA1 GDNF family receptor alpha 1 [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100677545, updated on 11-Apr-2024

Summary

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Gene symbol
GFRA1
Gene description
GDNF family receptor alpha 1
See related
EnsemblRapid:ENSLAFG00000005913
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Orthologs
human mouse all
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Genomic context

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See GFRA1 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 16 NC_087357.1 (18756607..18995730)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573430.1 (2954434..3192715)

Chromosome 16 - NC_087357.1Genomic Context describing neighboring genes Neighboring gene pancreatic lipase related protein 3 Neighboring gene coiled-coil domain containing 172 Neighboring gene attractin like 1 Neighboring gene TruB pseudouridine synthase family member 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nervous system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GDNF family receptor alpha-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087357.1 Reference mLoxAfr1.hap2

    Range
    18756607..18995730
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064269268.1 → XP_064125338.1  GDNF family receptor alpha-1 isoform X2

    Related
    ENSLAFP00000027471.2, ENSLAFT00000029060.2

  2. XM_064269267.1 → XP_064125337.1  GDNF family receptor alpha-1 isoform X1

    Related
    ENSLAFP00000004958.4, ENSLAFT00000005913.4
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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