U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TOR1AIP1 torsin 1A interacting protein 1 [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100675468, updated on 11-Apr-2024

Summary

Go to the top of the page Help
Gene symbol
TOR1AIP1
Gene description
torsin 1A interacting protein 1
See related
EnsemblRapid:ENSLAFG00000012811
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See TOR1AIP1 in Genome Data Viewer
Location:
chromosome: 25
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 25 NC_087366.1 (22960546..23004209, complement)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573436.1 (20897192..20940936, complement)

Chromosome 25 - NC_087366.1Genomic Context describing neighboring genes Neighboring gene quiescin sulfhydryl oxidase 1 Neighboring gene centrosomal protein 350 Neighboring gene torsin 1A interacting protein 2 Neighboring gene protein FAM163A Neighboring gene tudor domain containing 5

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nuclear membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
torsin-1A-interacting protein 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087366.1 Reference mLoxAfr1.hap2

    Range
    22960546..23004209 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003410863.4 → XP_003410911.1  torsin-1A-interacting protein 1 isoform X5

    UniProtKB/TrEMBL
    G3TA49
    Conserved Domains (1) summary
    pfam05609
    Location:160 → 584
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  2. XM_023549226.2 → XP_023404994.1  torsin-1A-interacting protein 1 isoform X4

    UniProtKB/TrEMBL
    G3TA49
    Related
    ENSLAFP00000050549.1, ENSLAFT00000063862.1
    Conserved Domains (1) summary
    pfam05609
    Location:160 → 595
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  3. XM_010590981.3 → XP_010589283.1  torsin-1A-interacting protein 1 isoform X3

    UniProtKB/TrEMBL
    G3TA49
    Related
    ENSLAFP00000010715.5, ENSLAFT00000012812.5
    Conserved Domains (1) summary
    pfam05609
    Location:160 → 599
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  4. XM_010590980.3 → XP_010589282.1  torsin-1A-interacting protein 1 isoform X2

    UniProtKB/TrEMBL
    G3TA49
    Related
    ENSLAFP00000036542.1, ENSLAFT00000064999.1
    Conserved Domains (1) summary
    pfam05609
    Location:160 → 599
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  5. XM_010590979.3 → XP_010589281.1  torsin-1A-interacting protein 1 isoform X1

    UniProtKB/TrEMBL
    G3TA49
    Related
    ENSLAFP00000043712.1, ENSLAFT00000065353.1
    Conserved Domains (1) summary
    pfam05609
    Location:160 → 614
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.