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FASN fatty acid synthase [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100674176, updated on 11-Apr-2024

Summary

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Gene symbol
FASN
Gene description
fatty acid synthase
See related
EnsemblRapid:ENSLAFG00000002825
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Orthologs
human mouse all
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Genomic context

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See FASN in Genome Data Viewer
Location:
chromosome: 18
Exon count:
64
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 18 NC_087359.1 (11221742..11354521)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573469.1 (898532..913555)

Chromosome 18 - NC_087359.1Genomic Context describing neighboring genes Neighboring gene casein kinase 1 delta Neighboring gene solute carrier family 16 member 3 Neighboring gene uncharacterized LOC135228052 Neighboring gene dihydrouridine synthase 1 like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-oxoacyl-[acyl-carrier-protein] synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fatty acid synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphopantetheine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in centriole replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in microtubule nucleation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centriolar satellite IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in centriole IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in spindle microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fatty acid synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087359.1 Reference mLoxAfr1.hap2

    Range
    11221742..11354521
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064270470.1 → XP_064126540.1  fatty acid synthase isoform X2

  2. XM_064270476.1 → XP_064126546.1  fatty acid synthase isoform X5

    Related
    ENSLAFP00000002676.5, ENSLAFT00000003218.5

  3. XM_064270477.1 → XP_064126547.1  fatty acid synthase isoform X6

  4. XM_064270478.1 → XP_064126548.1  fatty acid synthase isoform X7

  5. XM_064270475.1 → XP_064126545.1  fatty acid synthase isoform X4

  6. XM_064270469.1 → XP_064126539.1  fatty acid synthase isoform X1

  7. XM_064270474.1 → XP_064126544.1  fatty acid synthase isoform X3

    Related
    ENSLAFP00000002368.4, ENSLAFT00000002829.4

  8. XM_064270472.1 → XP_064126542.1  fatty acid synthase isoform X3

  9. XM_064270473.1 → XP_064126543.1  fatty acid synthase isoform X3

RNA

  1. XR_010318257.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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