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PGAM1 phosphoglycerate mutase 1 [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100672423, updated on 11-Apr-2024

Summary

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Gene symbol
PGAM1
Gene description
phosphoglycerate mutase 1
See related
EnsemblRapid:ENSLAFG00000044248
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Orthologs
human mouse all
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Genomic context

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See PGAM1 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 16 NC_087357.1 (36515159..36522156, complement)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573430.1 (20726996..20733987, complement)

Chromosome 16 - NC_087357.1Genomic Context describing neighboring genes Neighboring gene zinc finger DHHC-type palmitoyltransferase 16 Neighboring gene exosome component 1 Neighboring gene uncharacterized LOC104845805 Neighboring gene ribosomal RNA processing 12 homolog Neighboring gene FRAT regulator of WNT signaling pathway 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables intramolecular phosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolytic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphoglycerate mutase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087357.1 Reference mLoxAfr1.hap2

    Range
    36515159..36522156 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003409208.4 → XP_003409256.1  phosphoglycerate mutase 1

    UniProtKB/TrEMBL
    G3TG32, G3UBH6
    Related
    ENSLAFP00000049560.1, ENSLAFT00000061613.1
    Conserved Domains (1) summary
    PRK14115
    Location:4 → 253
    gpmA; phosphoglyceromutase; Provisional
Nucleotide Protein
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Gene LinkOut

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