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B3GNT5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100672153, updated on 2-May-2024

Summary

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Gene symbol
B3GNT5
Gene description
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5
See related
EnsemblRapid:ENSLAFG00000043504
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Orthologs
human mouse all
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Genomic context

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See B3GNT5 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 1 NC_087342.1 (31637888..31641402, complement)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573445.1 (3818252..3841038)

Chromosome 1 - NC_087342.1Genomic Context describing neighboring genes Neighboring gene kelch like family member 6 Neighboring gene small nucleolar RNA SNORA81 Neighboring gene MCF.2 cell line derived transforming sequence-like 2 Neighboring gene probable guanine nucleotide exchange factor MCF2L2 Neighboring gene lysosomal associated membrane protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087342.1 Reference mLoxAfr1.hap2

    Range
    31637888..31641402 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010592806.3 → XP_010591108.1  lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase

    See identical proteins and their annotated locations for XP_010591108.1

    UniProtKB/TrEMBL
    G3SLL4
    Related
    ENSLAFP00000040489.1, ENSLAFT00000063611.1
    Conserved Domains (1) summary
    cl21608
    Location:104 → 301
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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