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GNPTAB N-acetylglucosamine-1-phosphate transferase subunits alpha and beta [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100668883, updated on 11-Apr-2024

Summary

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Gene symbol
GNPTAB
Gene description
N-acetylglucosamine-1-phosphate transferase subunits alpha and beta
See related
EnsemblRapid:ENSLAFG00000004687
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Orthologs
human mouse all
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Genomic context

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See GNPTAB in Genome Data Viewer
Location:
chromosome: 4
Exon count:
24
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 4 NC_087345.1 (29081365..29194146)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573422.1 (97175059..97286611, complement)

Chromosome 4 - NC_087345.1Genomic Context describing neighboring genes Neighboring gene WASH complex subunit 3 Neighboring gene DNA damage regulated autophagy modulator 1 Neighboring gene synaptonemal complex protein 3 Neighboring gene choline phosphotransferase 1 Neighboring gene myosin binding protein C1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan processing to lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetylglucosamine-1-phosphotransferase subunits alpha/beta
Names
N-acetylglucosamine-1-phosphate transferase alpha and beta subunits

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087345.1 Reference mLoxAfr1.hap2

    Range
    29081365..29194146
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003405293.4 → XP_003405341.2  N-acetylglucosamine-1-phosphotransferase subunits alpha/beta isoform X1

  2. XM_023538866.2 → XP_023394634.2  N-acetylglucosamine-1-phosphotransferase subunits alpha/beta isoform X2

  3. XM_023538871.2 → XP_023394639.2  N-acetylglucosamine-1-phosphotransferase subunits alpha/beta isoform X4

    Related
    ENSLAFP00000026793.2, ENSLAFT00000026340.2

  4. XM_023538867.2 → XP_023394635.2  N-acetylglucosamine-1-phosphotransferase subunits alpha/beta isoform X3

    Related
    ENSLAFP00000003914.4, ENSLAFT00000004687.4
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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