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EIF1B eukaryotic translation initiation factor 1B [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100665533, updated on 11-Apr-2024

Summary

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Gene symbol
EIF1B
Gene description
eukaryotic translation initiation factor 1B
See related
EnsemblRapid:ENSLAFG00000036144
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Orthologs
human mouse all
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Genomic context

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See EIF1B in Genome Data Viewer
Location:
chromosome: 27
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 27 NC_087368.1 (38926864..38935905)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573456.1 (3568..6429, complement)

Chromosome 27 - NC_087368.1Genomic Context describing neighboring genes Neighboring gene myelin associated oligodendrocyte basic protein Neighboring gene myosin VIIA and Rab interacting protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribosomal small subunit binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation initiation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translational initiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of eukaryotic 43S preinitiation complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
eukaryotic translation initiation factor 1b

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087368.1 Reference mLoxAfr1.hap2

    Range
    38926864..38935905
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003415693.4 → XP_003415741.1  eukaryotic translation initiation factor 1b

    See identical proteins and their annotated locations for XP_003415741.1

    UniProtKB/TrEMBL
    G3SN16, G3SR97
    Related
    ENSLAFP00000047057.1, ENSLAFT00000056662.1
    Conserved Domains (1) summary
    cl00229
    Location:4 → 113
    eIF1_SUI1_like; Eukaryotic initiation factor 1 and related proteins
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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