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NR3C2 nuclear receptor subfamily 3 group C member 2 [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100661181, updated on 19-Jun-2024

Summary

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Gene symbol
NR3C2
Gene description
nuclear receptor subfamily 3 group C member 2
See related
EnsemblRapid:ENSLAFG00000022550
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Orthologs
human mouse all
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Genomic context

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See NR3C2 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 13 NC_087354.1 (69658779..70008114, complement)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573471.1 (8715042..9067382)

Chromosome 13 - NC_087354.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 184C Neighboring gene protein arginine methyltransferase 9 Neighboring gene Rho GTPase activating protein 10 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC135227280

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables estrogen response element binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nuclear receptor-mediated steroid hormone signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mineralocorticoid receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087354.1 Reference mLoxAfr1.hap2

    Range
    69658779..70008114 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064267555.1 → XP_064123625.1  mineralocorticoid receptor

    Related
    ENSLAFP00000017164.3, ENSLAFT00000022551.3

RNA

  1. XR_010317445.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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