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PYGM glycogen phosphorylase, muscle associated [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100661005, updated on 11-Apr-2024

Summary

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Gene symbol
PYGM
Gene description
glycogen phosphorylase, muscle associated
See related
EnsemblRapid:ENSLAFG00000017090
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Orthologs
human mouse all
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Genomic context

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See PYGM in Genome Data Viewer
Location:
chromosome: 7
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 7 NC_087348.1 (10048329..10065449)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573491.1 (4722221..4736469)

Chromosome 7 - NC_087348.1Genomic Context describing neighboring genes Neighboring gene mitogen-activated protein kinase kinase kinase kinase 2 Neighboring gene splicing factor 1 Neighboring gene RAS guanyl releasing protein 2 Neighboring gene neurexin 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycogen phosphorylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables pyridoxal phosphate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycogen catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycogen phosphorylase, muscle form
Names
phosphorylase, glycogen, muscle

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087348.1 Reference mLoxAfr1.hap2

    Range
    10048329..10065449
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003419441.4 → XP_003419489.1  glycogen phosphorylase, muscle form

    UniProtKB/TrEMBL
    G3TI75
    Related
    ENSLAFP00000014331.3, ENSLAFT00000017093.4
    Conserved Domains (2) summary
    cd04300
    Location:29 → 828
    GT1_Glycogen_Phosphorylase; This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of ...
    TIGR02093
    Location:32 → 828
    P_ylase; glycogen/starch/alpha-glucan phosphorylases
Nucleotide Protein
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Gene LinkOut

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