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LINC01311 long intergenic non-protein coding RNA 1311 [ Homo sapiens (human) ]

Gene ID: 100652736, updated on 17-Sep-2024

Summary

Official Symbol
LINC01311provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1311provided by HGNC
Primary source
HGNC:HGNC:50503
See related
AllianceGenome:HGNC:50503
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See LINC01311 in Genome Data Viewer
Location:
22q11.21
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (19171706..19172832)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (19547639..19548765)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (19159219..19160345)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112268297 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:19131233-19131739 Neighboring gene ess-2 splicing factor homolog Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:19136757-19137256 Neighboring gene goosecoid homeobox 2 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:19156355-19157292 Neighboring gene H3K27ac hESC enhancer GRCh37_chr22:19159167-19160103 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:19162549-19163296 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:19165547-19166294 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13457 Neighboring gene solute carrier family 25 member 1 Neighboring gene clathrin heavy chain like 1 Neighboring gene uncharacterized LOC112268289

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_103767.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    BU620535, BU621681, CV570998

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

    Range
    19171706..19172832
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060946.1 Alternate T2T-CHM13v2.0

    Range
    19547639..19548765
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)