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LOC100651585 C1GALT1-specific chaperone 1 [ Bombus terrestris (buff-tailed bumblebee) ]

Gene ID: 100651585, updated on 1-Oct-2024

Summary

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Gene symbol
LOC100651585
Gene description
C1GALT1-specific chaperone 1
See related
EnsemblRapid:ENSBTSG00005021296
Gene type
protein coding
RefSeq status
MODEL
Organism
Bombus terrestris
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Bombus; Bombus
Orthologs
honey bee all
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Genomic context

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See LOC100651585 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
3
Annotation release Status Assembly Chr Location
103 current iyBomTerr1.2 (GCF_910591885.1) 16 NC_063284.1 (5029157..5031216)
102 previous assembly Bter_1.0 (GCF_000214255.1) Linkage Group LG B16 NC_015777.1 (2659923..2661927)

Chromosome 16 - NC_063284.1Genomic Context describing neighboring genes Neighboring gene vacuolar protein sorting 13D Neighboring gene tumor protein p63-regulated gene 1-like protein Neighboring gene uncharacterized LOC125386571 Neighboring gene Hemolectin Neighboring gene replication in mitochondria 2 Neighboring gene uncharacterized LOC125386574

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in O-glycan processing, core 1 IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C1GALT1-specific chaperone 1; glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bombus terrestris Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference iyBomTerr1.2

Genomic

  1. NC_063284.1 Reference iyBomTerr1.2

    Range
    5029157..5031216
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012317623.3 → XP_012173013.1  C1GALT1-specific chaperone 1 isoform X1

    UniProtKB/TrEMBL
    A0A9B2JXP2
    Related
    ENSBTSP00005056135.1, ENSBTST00005072460.1
    Conserved Domains (1) summary
    cl21608
    Location:135 → 247
    Galactosyl_T; Galactosyltransferase

  2. XM_012317624.3 → XP_012173014.1  glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 isoform X2

    UniProtKB/TrEMBL
    A0A9B2JXD3
    Related
    ENSBTSP00005037986.1, ENSBTST00005061071.1
    Conserved Domains (1) summary
    cl21608
    Location:135 → 247
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

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