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Csk C-terminal Src kinase [ Bombus terrestris (buff-tailed bumblebee) ]

Gene ID: 100650959, updated on 1-Oct-2024

Summary

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Gene symbol
Csk
Gene description
C-terminal Src kinase
See related
EnsemblRapid:ENSBTSG00005031494
Gene type
protein coding
RefSeq status
MODEL
Organism
Bombus terrestris
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Bombus; Bombus
Orthologs
honey bee all
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Genomic context

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See Csk in Genome Data Viewer
Location:
chromosome: 6
Exon count:
9
Annotation release Status Assembly Chr Location
103 current iyBomTerr1.2 (GCF_910591885.1) 6 NC_063274.1 (5703175..5730065)
102 previous assembly Bter_1.0 (GCF_000214255.1) Linkage Group LG B06 NC_015767.1 (3234163..3261435)

Chromosome 6 - NC_063274.1Genomic Context describing neighboring genes Neighboring gene lysophospholipid acyltransferase 6 Neighboring gene uncharacterized LOC125385348 Neighboring gene uncharacterized LOC125385337 Neighboring gene uncharacterized LOC100646656 Neighboring gene uncharacterized LOC100648940 Neighboring gene UFM1 specific peptidase 2 Neighboring gene translocase of inner membrane 8 Neighboring gene lachesin Neighboring gene U4 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Study of the Metatranscriptome of Eight Social and Solitary Wild Bee Species Reveals Novel Viruses and Bee Parasites. Schoonvaere K, et al. Front Microbiol, 2018. PMID 29491849, Free PMC Article
  2. Genes involved in convergent evolution of eusociality in bees. Woodard SH, et al. Proc Natl Acad Sci U S A, 2011 May 3. PMID 21482769, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein tyrosine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tyrosine-protein kinase CSK

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bombus terrestris Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference iyBomTerr1.2

Genomic

  1. NC_063274.1 Reference iyBomTerr1.2

    Range
    5703175..5730065
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003395921.4 → XP_003395969.1  tyrosine-protein kinase CSK

    See identical proteins and their annotated locations for XP_003395969.1

    UniProtKB/TrEMBL
    A0A9B2JF36
    Conserved Domains (3) summary
    cd09937
    Location:116 → 213
    SH2_csk_like; Src homology 2 (SH2) domain found in Carboxyl-Terminal Src Kinase (Csk)
    smart00221
    Location:236 → 481
    STYKc; Protein kinase; unclassified specificity
    cd05039
    Location:229 → 474
    PTKc_Csk_like; Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

  2. XM_012309144.3 → XP_012164534.1  tyrosine-protein kinase CSK

    See identical proteins and their annotated locations for XP_012164534.1

    UniProtKB/TrEMBL
    A0A9B2JF36
    Conserved Domains (3) summary
    cd09937
    Location:116 → 213
    SH2_csk_like; Src homology 2 (SH2) domain found in Carboxyl-Terminal Src Kinase (Csk)
    smart00221
    Location:236 → 481
    STYKc; Protein kinase; unclassified specificity
    cd05039
    Location:229 → 474
    PTKc_Csk_like; Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

  3. XM_012309145.3 → XP_012164535.1  tyrosine-protein kinase CSK

    See identical proteins and their annotated locations for XP_012164535.1

    UniProtKB/TrEMBL
    A0A9B2JF36
    Related
    ENSBTSP00005069051.1, ENSBTST00005082045.1
    Conserved Domains (3) summary
    cd09937
    Location:116 → 213
    SH2_csk_like; Src homology 2 (SH2) domain found in Carboxyl-Terminal Src Kinase (Csk)
    smart00221
    Location:236 → 481
    STYKc; Protein kinase; unclassified specificity
    cd05039
    Location:229 → 474
    PTKc_Csk_like; Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases
Nucleotide Protein
Heading Accession and Version

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