U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Kaz Katazuke [ Bombus terrestris (buff-tailed bumblebee) ]

Gene ID: 100648167, updated on 10-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
Kaz
Gene description
Katazuke
See related
EnsemblRapid:ENSBTSG00005024495
Gene type
protein coding
RefSeq status
MODEL
Organism
Bombus terrestris
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Bombus; Bombus
Orthologs
fruit fly honey bee all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Kaz in Genome Data Viewer
Location:
chromosome: 8
Exon count:
5
Annotation release Status Assembly Chr Location
103 current iyBomTerr1.2 (GCF_910591885.1) 8 NC_063276.1 (409088..411258, complement)
102 previous assembly Bter_1.0 (GCF_000214255.1) Linkage Group LG B08 NC_015769.1 (223139..225578, complement)

Chromosome 8 - NC_063276.1Genomic Context describing neighboring genes Neighboring gene trabid Neighboring gene uncharacterized LOC125385536 Neighboring gene Equilibrative nucleoside transporter 2 Neighboring gene C-terminal binding protein Neighboring gene uncharacterized LOC110119499 Neighboring gene uncharacterized LOC125385537

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genes involved in convergent evolution of eusociality in bees. Woodard SH, et al. Proc Natl Acad Sci U S A, 2011 May 3. PMID 21482769, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of GID complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
E3 ubiquitin-protein transferase MAEA
Names
macrophage erythroblast attacher

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Bombus terrestris Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference iyBomTerr1.2

Genomic

  1. NC_063276.1 Reference iyBomTerr1.2

    Range
    409088..411258 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003397115.4 → XP_003397163.1  E3 ubiquitin-protein transferase MAEA

    See identical proteins and their annotated locations for XP_003397163.1

    UniProtKB/TrEMBL
    A0A9B0BZ40
    Related
    ENSBTSP00005051987.1, ENSBTST00005043166.1
    Conserved Domains (3) summary
    smart00667
    Location:110 → 141
    LisH; Lissencephaly type-1-like homology motif
    cd16659
    Location:326 → 375
    RING-Ubox_Emp; U-box domain, a modified RING finger, found in erythroblast macrophage protein (Emp) and similar proteins
    pfam10607
    Location:149 → 291
    CLTH; CTLH/CRA C-terminal to LisH motif domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases