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sfl N-deacetylase and N-sulfotransferase sfl [ Bombus terrestris (buff-tailed bumblebee) ]

Gene ID: 100643169, updated on 22-May-2024

Summary

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Gene symbol
sfl
Gene description
N-deacetylase and N-sulfotransferase sfl
See related
EnsemblRapid:ENSBTSG00005034798
Gene type
protein coding
RefSeq status
MODEL
Organism
Bombus terrestris
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Apidae; Bombus; Bombus
Orthologs
fruit fly all
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Genomic context

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See sfl in Genome Data Viewer
Location:
chromosome: 10
Exon count:
17
Annotation release Status Assembly Chr Location
103 current iyBomTerr1.2 (GCF_910591885.1) 10 NC_063278.1 (7632627..8001613, complement)
102 previous assembly Bter_1.0 (GCF_000214255.1) Linkage Group LG B10 NC_015771.1 (7194138..7291775, complement)

Chromosome 10 - NC_063278.1Genomic Context describing neighboring genes Neighboring gene protein javelin Neighboring gene uncharacterized LOC105666128 Neighboring gene mitochondrial calcium uniporter Neighboring gene ammonium transporter 1 member 3-like Neighboring gene uncharacterized LOC125385834 Neighboring gene uncharacterized LOC100643051 Neighboring gene uncharacterized LOC100642934 Neighboring gene chymotrypsinogen B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Study of the Metatranscriptome of Eight Social and Solitary Wild Bee Species Reveals Novel Viruses and Bee Parasites. Schoonvaere K, et al. Front Microbiol, 2018. PMID 29491849, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine N-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables deacetylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
bifunctional heparan sulfate N-deacetylase/N-sulfotransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Bombus terrestris Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference iyBomTerr1.2

Genomic

  1. NC_063278.1 Reference iyBomTerr1.2

    Range
    7632627..8001613 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_048409530.1 → XP_048265487.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase

    UniProtKB/TrEMBL
    A0A9B7CXI9

  2. XM_048409529.1 → XP_048265486.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase

    UniProtKB/TrEMBL
    A0A9B7CXI9

  3. XM_020864817.2 → XP_020720476.1  bifunctional heparan sulfate N-deacetylase/N-sulfotransferase

    UniProtKB/TrEMBL
    A0A9B7CXI9
    Related
    ENSBTSP00005068957.1, ENSBTST00005045136.1
    Conserved Domains (2) summary
    pfam00685
    Location:608 → 856
    Sulfotransfer_1; Sulfotransferase domain
    pfam12062
    Location:38 → 519
    HSNSD; heparan sulfate-N-deacetylase
Nucleotide Protein
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