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LOC100637620 beta-1,3-galactosyltransferase 6-like [ Amphimedon queenslandica ]

Gene ID: 100637620, updated on 10-Oct-2024

Summary

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Gene symbol
LOC100637620
Gene description
beta-1,3-galactosyltransferase 6-like
See related
EnsemblRapid:LOC100637620
Gene type
protein coding
RefSeq status
MODEL
Organism
Amphimedon queenslandica
Lineage
Eukaryota; Metazoa; Porifera; Demospongiae; Heteroscleromorpha; Haplosclerida; Niphatidae; Amphimedon
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Genomic context

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See LOC100637620 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
102 current v1.0 (GCF_000090795.1) Unplaced Scaffold NW_003546260.1 (293052..294036, complement)

NW_003546260.1Genomic Context describing neighboring genes Neighboring gene non-structural maintenance of chromosomes element 3 homolog Neighboring gene green-sensitive opsin P521-like Neighboring gene uncharacterized LOC109593820 Neighboring gene dnaJ homolog subfamily C member 2-like Neighboring gene PX domain-containing protein kinase-like protein Neighboring gene membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2-like Neighboring gene uncharacterized LOC100635473 Neighboring gene transfer RNA isoleucine (anticodon GAU)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003546260.1 Unplaced Scaffold Reference v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycosaminoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 6-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Amphimedon queenslandica Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v1.0 Primary Assembly

Genomic

  1. NW_003546260.1 Reference v1.0 Primary Assembly

    Range
    293052..294036 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003383956.2 → XP_003384004.1  beta-1,3-galactosyltransferase 6-like

    UniProtKB/TrEMBL
    A0A1X7VK39, A0AAN0IAL8
    Related
    XP_003384004.1, XM_003383956.2
    Conserved Domains (1) summary
    cl21608
    Location:80 → 257
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

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