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LOC100633202 beta-1,4-galactosyltransferase 7-like [ Amphimedon queenslandica ]

Gene ID: 100633202, updated on 7-Dec-2023

Summary

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Gene symbol
LOC100633202
Gene description
beta-1,4-galactosyltransferase 7-like
See related
EnsemblRapid:LOC100633202
Gene type
protein coding
RefSeq status
MODEL
Organism
Amphimedon queenslandica
Lineage
Eukaryota; Metazoa; Porifera; Demospongiae; Heteroscleromorpha; Haplosclerida; Niphatidae; Amphimedon
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Genomic context

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See LOC100633202 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current v1.0 (GCF_000090795.1) Unplaced Scaffold NW_003546253.1 (599040..601644)

NW_003546253.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105316405 Neighboring gene protein TEX261-like Neighboring gene serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B Neighboring gene carbonic anhydrase 1 Neighboring gene uncharacterized LOC100633330 Neighboring gene uncharacterized LOC109589845 Neighboring gene serine/threonine-protein kinase haspin-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003546253.1 Unplaced Scaffold Reference v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables xylosylprotein 4-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 7-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Amphimedon queenslandica Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v1.0 Primary Assembly

Genomic

  1. NW_003546253.1 Reference v1.0 Primary Assembly

    Range
    599040..601644
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003383430.3 → XP_003383478.3  beta-1,4-galactosyltransferase 7-like

    UniProtKB/TrEMBL
    A0A1X7VMR9
    Related
    XP_003383478.3, XM_003383430.3
    Conserved Domains (1) summary
    cd00899
    Location:75 → 280
    b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
Nucleotide Protein
Heading Accession and Version

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