U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC100633017 EGF domain-specific O-linked N-acetylglucosamine transferase-like [ Amphimedon queenslandica ]

Gene ID: 100633017, updated on 10-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
LOC100633017
Gene description
EGF domain-specific O-linked N-acetylglucosamine transferase-like
See related
EnsemblRapid:LOC100633017
Gene type
protein coding
RefSeq status
MODEL
Organism
Amphimedon queenslandica
Lineage
Eukaryota; Metazoa; Porifera; Demospongiae; Heteroscleromorpha; Haplosclerida; Niphatidae; Amphimedon
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC100633017 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current v1.0 (GCF_000090795.1) Unplaced Scaffold NW_003546720.1 (5970..7743, complement)

NW_003546720.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109585577 Neighboring gene EGF domain-specific O-linked N-acetylglucosamine transferase-like Neighboring gene uncharacterized LOC109585584 Neighboring gene pectin acetylesterase 4-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_003546720.1 Unplaced Scaffold Reference v1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-GlcNAcylation via threonine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum lumen IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
EGF domain-specific O-linked N-acetylglucosamine transferase-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Amphimedon queenslandica Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v1.0 Primary Assembly

Genomic

  1. NW_003546720.1 Reference v1.0 Primary Assembly

    Range
    5970..7743 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020001711.1 → XP_019857270.1  EGF domain-specific O-linked N-acetylglucosamine transferase-like

    UniProtKB/TrEMBL
    A0AAN0JJR6
    Related
    XP_019857270.1, XM_020001711.1
    Conserved Domains (1) summary
    pfam04577
    Location:2 → 127
    DUF563; Protein of unknown function (DUF563)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases