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LOC100630657 carbonyl reductase [NADPH] 1 [ Equus caballus (horse) ]

Gene ID: 100630657, updated on 15-Aug-2024

Summary

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Gene symbol
LOC100630657
Gene description
carbonyl reductase [NADPH] 1
See related
Ensembl:ENSECAG00000022317
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
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Genomic context

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See LOC100630657 in Genome Data Viewer
Location:
chromosome: 26
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 26 NC_009169.3 (33750089..33764173)

Chromosome 26 - NC_009169.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100061622 Neighboring gene carbonyl reductase [NADPH] 1-like Neighboring gene carbonyl reductase [NADPH] 3 pseudogene Neighboring gene uncharacterized LOC111770802 Neighboring gene carbonyl reductase [NADPH] 3 Neighboring gene DOP1 leucine zipper like protein B

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009169.3 Chromosome 26 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables carbonyl reductase (NADPH) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbonyl reductase [NADPH] 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009169.3 Reference EquCab3.0 Primary Assembly

    Range
    33750089..33764173
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023630115.1 → XP_023485883.1  carbonyl reductase [NADPH] 1

    UniProtKB/TrEMBL
    A0A9L0T5G0, F6Z073
    Related
    ENSECAP00000019723.2, ENSECAT00000023781.4
    Conserved Domains (1) summary
    cd05324
    Location:5 → 279
    carb_red_PTCR-like_SDR_c; Porcine testicular carbonyl reductase (PTCR)-like, classical (c) SDRs
Nucleotide Protein
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