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CD209 CD209 molecule [ Equus caballus (horse) ]

Gene ID: 100629660, updated on 15-Aug-2024

Summary

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Gene symbol
CD209
Gene description
CD209 molecule
See related
Ensembl:ENSECAG00000021212
Gene type
protein coding
RefSeq status
MODEL
Organism
Equus caballus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
Orthologs
human all
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Genomic context

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See CD209 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_08 current EquCab3.0 (GCF_002863925.1) 7 NC_009150.3 (5591802..5597380, complement)

Chromosome 7 - NC_009150.3Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111774201 Neighboring gene C-type lectin domain family 4 member G Neighboring gene CD209 antigen-like protein E Neighboring gene ecotropic viral integration site 5 like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_009150.3 Chromosome 7 Reference EquCab3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables D-mannose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fucose binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in biological process involved in interspecies interaction between organisms IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in external side of plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CD209 antigen
Names
CD209 antigen-like protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference EquCab3.0 Primary Assembly

Genomic

  1. NC_009150.3 Reference EquCab3.0 Primary Assembly

    Range
    5591802..5597380 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014741139.2 → XP_014596625.1  CD209 antigen isoform X2

    Conserved Domains (1) summary
    cd03590
    Location:77 → 200
    CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)

  2. XM_005611504.3 → XP_005611561.1  CD209 antigen isoform X1

    See identical proteins and their annotated locations for XP_005611561.1

    UniProtKB/TrEMBL
    A0A9L0SUC3
    Related
    ENSECAP00000078467.1, ENSECAT00000122612.1
    Conserved Domains (1) summary
    cd03590
    Location:107 → 230
    CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)
Nucleotide Protein
Heading Accession and Version

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