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Mir4819 microRNA mir-4819 [ Saccoglossus kowalevskii ]

Gene ID: 100628506, updated on 5-Feb-2022

Summary

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Gene symbol
Mir4819
Gene description
microRNA mir-4819
See related
EnsemblRapid:GeneID_100628506 miRBase:MI0017556
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Saccoglossus kowalevskii
Lineage
Eukaryota; Metazoa; Hemichordata; Enteropneusta; Harrimaniidae; Saccoglossus
Also known as
sko-mir-4819
Summary
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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Genomic context

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See Mir4819 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
1
Annotation release Status Assembly Chr Location
101 current Skow_1.1 (GCF_000003605.2) Unplaced Scaffold NW_003105607.1 (246687..246786)

NW_003105607.1Genomic Context describing neighboring genes Neighboring gene solute carrier organic anion transporter family member 3A1-like Neighboring gene 5-hydroxytryptamine receptor 1B-like Neighboring gene 5-hydroxytryptamine receptor 7-like Neighboring gene D(1)-like dopamine receptor-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003105607 unplaced scaffold reference Skow_1.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. microRNA complements in deuterostomes: origin and evolution of microRNAs. Campo-Paysaa F, et al. Evol Dev, 2011 Jan-Feb. PMID 21210939
  2. miRBase: microRNA sequences, targets and gene nomenclature. Griffiths-Jones S, et al. Nucleic Acids Res, 2006 Jan 1. PMID 16381832, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Other Names

  • microRNA 4819

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_038775.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    ACQM01115092
    Related
    NR_038775.1

RefSeqs of Annotated Genomes: Saccoglossus kowalevskii Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Skow_1.1 Primary Assembly

Genomic

  1. NW_003105607.1 Reference Skow_1.1 Primary Assembly

    Range
    246687..246786
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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