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ACBD7 acyl-CoA binding domain containing 7 [ Sus scrofa (pig) ]

Gene ID: 100626756, updated on 17-Aug-2024

Summary

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Official Symbol
ACBD7provided by VGNC
Official Full Name
acyl-CoA binding domain containing 7provided by VGNC
Primary source
VGNC:VGNC:95856
See related
Ensembl:ENSSSCG00000038184
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Biased expression in ovary (RPKM 6.2) and kidney (RPKM 0.2) See more
Orthologs
human mouse all
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Genomic context

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See ACBD7 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
4
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 10 NC_010452.4 (46740570..46751208)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 10 NC_010452.3 (51473758..51482998)

Chromosome 10 - NC_010452.4Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 171 member A1 Neighboring gene N-myristoyltransferase 2 Neighboring gene ribonuclease P/MRP subunit p38 Neighboring gene uncharacterized LOC110255690 Neighboring gene oleoyl-ACP hydrolase Neighboring gene meiosis/spermiogenesis associated 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fatty-acyl-CoA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acyl-CoA-binding domain-containing protein 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010452.4 Reference Sscrofa11.1 Primary Assembly

    Range
    46740570..46751208
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003357745.4 → XP_003357793.2  acyl-CoA-binding domain-containing protein 7

    UniProtKB/TrEMBL
    A0A286ZJN9, A0A8D0RWC7, A0A8D0WCI2
    Related
    ENSSSCP00000031694.1, ENSSSCT00000040198.1
    Conserved Domains (1) summary
    cl00221
    Location:3 → 87
    ACBP; Acyl CoA binding protein (ACBP) binds thiol esters of long fatty acids and coenzyme A in a one-to-one binding mode with high specificity and affinity. Acyl-CoAs are important intermediates in fatty lipid synthesis and fatty acid degradation and play a ...
Nucleotide Protein
Heading Accession and Version

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Research Materials