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SULT2B1 sulfotransferase family 2B member 1 [ Sus scrofa (pig) ]

Gene ID: 100626471, updated on 17-Aug-2024

Summary

Official Symbol
SULT2B1provided by VGNC
Official Full Name
sulfotransferase family 2B member 1provided by VGNC
Primary source
VGNC:VGNC:93614
See related
Ensembl:ENSSSCG00000023280
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Ubiquitous expression in subcutaneous adipose (RPKM 1.8), lung (RPKM 1.6) and 8 other tissues See more
Orthologs
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Genomic context

See SULT2B1 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
7
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 6 NC_010448.4 (53928248..53963443)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 6 NC_010448.3 (49700287..49710764)

Chromosome 6 - NC_010448.4Genomic Context describing neighboring genes Neighboring gene cytohesin 2 Neighboring gene lemur tyrosine kinase 3 Neighboring gene family with sequence similarity 83 member E Neighboring gene sperm acrosome associated 4 Neighboring gene ribosomal protein L18

Genomic regions, transcripts, and products

Expression

  • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in sulfation IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
sulfotransferase 2B1
Names
sulfotransferase family, cytosolic, 2B, member 1
NP_001230626.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001243697.1NP_001230626.1  sulfotransferase 2B1

    Status: VALIDATED

    Source sequence(s)
    AK349606
    UniProtKB/TrEMBL
    A0A4X1W1W2, I3LRP8
    Related
    ENSSSCP00000026787.2, ENSSSCT00000027392.3
    Conserved Domains (1) summary
    pfam00685
    Location:59304
    Sulfotransfer_1; Sulfotransferase domain

RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010448.4 Reference Sscrofa11.1 Primary Assembly

    Range
    53928248..53963443
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)