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LOC100624788 UDP-glucuronosyltransferase 2A1 [ Sus scrofa (pig) ]

Gene ID: 100624788, updated on 16-Nov-2023

Summary

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Gene symbol
LOC100624788
Gene description
UDP-glucuronosyltransferase 2A1
See related
Ensembl:ENSSSCG00000034976
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Also known as
UGT2A1
Expression
Biased expression in liver (RPKM 30.6), mixtures (RPKM 11.4) and 1 other tissue See more
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Genomic context

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See LOC100624788 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
8
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 8 NC_010450.4 (66646241..66689685, complement)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 8 NC_010450.3 (70984983..71021850, complement)

Chromosome 8 - NC_010450.4Genomic Context describing neighboring genes Neighboring gene UDP-glucuronosyltransferase 2C1 Neighboring gene UDP-glucuronosyltransferase 2C1-like Neighboring gene UDP-glucuronosyltransferase 2A2 pseudogene Neighboring gene uncharacterized LOC110262118 Neighboring gene sulfotransferase family cytosolic 1B member 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-glucuronosyltransferase 2A1; UDP-glucuronosyltransferase 2A3
Names
UDP glucuronosyltransferase 2 family, polypeptide A1, complex locus

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010450.4 Reference Sscrofa11.1 Primary Assembly

    Range
    66646241..66689685 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003356958.4 → XP_003357006.2  UDP-glucuronosyltransferase 2A1 isoform X2

    UniProtKB/TrEMBL
    A0A287B562, A0A8D0RC72, A0A8D1FUF9
    Related
    ENSSSCP00000051233.2, ENSSSCT00000051960.3
    Conserved Domains (1) summary
    pfam00201
    Location:22 → 516
    UDPGT; UDP-glucoronosyl and UDP-glucosyl transferase

  2. XM_005656509.3 → XP_005656566.2  UDP-glucuronosyltransferase 2A3 isoform X1

    UniProtKB/TrEMBL
    A0A8D0PK54, A0A8D1S095, A0A8W4F8Y7
    Related
    ENSSSCP00000074765.1, ENSSSCT00000100938.1
    Conserved Domains (1) summary
    pfam00201
    Location:31 → 525
    UDPGT; UDP-glucoronosyl and UDP-glucosyl transferase
Nucleotide Protein
Heading Accession and Version

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