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MIR548AG1 microRNA 548ag-1 [ Homo sapiens (human) ]

Gene ID: 100616450, updated on 10-Oct-2023

Summary

Official Symbol
MIR548AG1provided by HGNC
Official Full Name
microRNA 548ag-1provided by HGNC
Primary source
HGNC:HGNC:41625
See related
Ensembl:ENSG00000265829 miRBase:MI0016793; AllianceGenome:HGNC:41625
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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Genomic context

Location:
4q13.1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (60922619..60922684)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (64363145..64363210)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (61788337..61788402)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:60721283-60721784 Neighboring gene RNA, U6 small nuclear 1325, pseudogene Neighboring gene Sharpr-MPRA regulatory region 1726 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:61288221-61288721 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:61348812-61349396 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr4:61589695-61590894 Neighboring gene protein phosphatase 2 regulatory subunit B, gamma pseudogene Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:61702564-61703334 Neighboring gene long intergenic non-protein coding RNA 2496 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr4:61799272-61800471 Neighboring gene Sharpr-MPRA regulatory region 1933 Neighboring gene uncharacterized LOC124900173 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:62068190-62068762 Neighboring gene long intergenic non-protein coding RNA 2271 Neighboring gene ribosomal protein L17 pseudogene 19 Neighboring gene adhesion G protein-coupled receptor L3

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_039652.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AC093820
    Related
    ENST00000579932.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    60922619..60922684
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    64363145..64363210
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)