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MIR3689C microRNA 3689c [ Homo sapiens (human) ]

Gene ID: 100616333, updated on 10-Oct-2023

Summary

Official Symbol
MIR3689Cprovided by HGNC
Official Full Name
microRNA 3689cprovided by HGNC
Primary source
HGNC:HGNC:41816
See related
Ensembl:ENSG00000264744 miRBase:MI0016832; AllianceGenome:HGNC:41816
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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Genomic context

See MIR3689C in Genome Data Viewer
Location:
9q34.3
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (134849298..134849369, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (137741144..137741215, complement)

Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124902300 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:137546641-137547505 Neighboring gene COL5A1 antisense RNA 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:137547506-137548369 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:137549426-137550233 Neighboring gene collagen type V alpha 1 chain Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:137571911-137572432 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:137572433-137572952 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:137572953-137573473 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:137573474-137573993 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:137580636-137581426 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:137589714-137590538 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:137590539-137591361 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:137600147-137600714 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:137615715-137616537 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:137642670-137643182 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:137643183-137643695 Neighboring gene ReSE screen-validated silencer GRCh37_chr9:137644538-137644744 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29286 Neighboring gene uncharacterized LOC124902301 Neighboring gene H3K27ac hESC enhancer GRCh37_chr9:137665167-137665668 Neighboring gene ReSE screen-validated silencer GRCh37_chr9:137669421-137669566 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:137670079-137670688 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:137676102-137677054 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:137696519-137697019 Neighboring gene uncharacterized LOC101448202 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:137733985-137734819 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr9:137737131-137737631 Neighboring gene microRNA 3689d-1 Neighboring gene microRNA 3689a

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_039691.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AL603650
    Related
    ENST00000581239.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

    Range
    134849298..134849369 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)