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MIR1587 microRNA 1587 [ Homo sapiens (human) ]

Gene ID: 100616251, updated on 10-Oct-2023

Summary

Official Symbol
MIR1587provided by HGNC
Official Full Name
microRNA 1587provided by HGNC
Primary source
HGNC:HGNC:41596
See related
Ensembl:ENSG00000263972 miRBase:MI0016905; AllianceGenome:HGNC:41596
Gene type
ncRNA
RefSeq status
PROVISIONAL
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
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Genomic context

See MIR1587 in Genome Data Viewer
Location:
Xp11.4
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (39837561..39837613)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (39237740..39237792)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (39696815..39696867)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105373177 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene 1 Neighboring gene OOEP pseudogene 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29528 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:39675935-39676850 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:39676851-39677768 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:39686865-39687366 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:39687367-39687866 Neighboring gene ReSE screen-validated silencer GRCh37_chrX:39699064-39699252 Neighboring gene Sharpr-MPRA regulatory region 12649 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29529 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29530 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:39717183-39717683 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29531 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:39734537-39735038 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:39735039-39735538 Neighboring gene ribosomal protein S11 pseudogene 7 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29532 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:39756695-39757676 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:39765114-39765903 Neighboring gene MED14-independent group 3 enhancer GRCh37_chrX:39766731-39767930 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:39787967-39788468 Neighboring gene uncharacterized LOC105373180 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:39788469-39788968 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29533

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_039763.1 RNA Sequence

    Status: PROVISIONAL

    Source sequence(s)
    AL592164
    Related
    ENST00000583319.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    39837561..39837613
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    39237740..39237792
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)