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PIGV phosphatidylinositol glycan anchor biosynthesis class V [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100607268, updated on 8-Mar-2024

Summary

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Gene symbol
PIGV
Gene description
phosphatidylinositol glycan anchor biosynthesis class V
See related
EnsemblRapid:ENSNLEG00000009372
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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See PIGV in Genome Data Viewer
Location:
chromosome: 24
Exon count:
6
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 24 NC_044404.1 (26647003..26657304)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 24 NC_019839.1 (25661025..25668212)

Chromosome 24 - NC_044404.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U13 Neighboring gene AT-rich interaction domain 1A Neighboring gene zinc finger DHHC-type palmitoyltransferase 18 Neighboring gene stratifin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycolipid mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of mannosyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044404.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    26647003..26657304
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030805671.1 → XP_030661531.1  GPI mannosyltransferase 2

    UniProtKB/TrEMBL
    G1RDW5
    Conserved Domains (1) summary
    pfam04188
    Location:8 → 493
    Mannosyl_trans2; Mannosyltransferase (PIG-V)

  2. XM_030805670.1 → XP_030661530.1  GPI mannosyltransferase 2

    UniProtKB/TrEMBL
    G1RDW5
    Conserved Domains (1) summary
    pfam04188
    Location:8 → 493
    Mannosyl_trans2; Mannosyltransferase (PIG-V)

  3. XM_030805669.1 → XP_030661529.1  GPI mannosyltransferase 2

    UniProtKB/TrEMBL
    G1RDW5
    Conserved Domains (1) summary
    pfam04188
    Location:8 → 493
    Mannosyl_trans2; Mannosyltransferase (PIG-V)

  4. XM_003271664.4 → XP_003271712.1  GPI mannosyltransferase 2

    UniProtKB/TrEMBL
    G1RDW5
    Related
    ENSNLEP00000011415.1, ENSNLET00000011975.3
    Conserved Domains (1) summary
    pfam04188
    Location:8 → 493
    Mannosyl_trans2; Mannosyltransferase (PIG-V)
Nucleotide Protein
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