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UBXN2B UBX domain protein 2B [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100605031, updated on 8-Mar-2024

Summary

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Gene symbol
UBXN2B
Gene description
UBX domain protein 2B
See related
EnsemblRapid:ENSNLEG00000033129
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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See UBXN2B in Genome Data Viewer
Location:
chromosome: 16
Exon count:
10
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 16 NC_044396.1 (46851791..46890683)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 16 NC_019831.1 (49105574..49144464)

Chromosome 16 - NC_044396.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC100603477 Neighboring gene family with sequence similarity 110 member B Neighboring gene 60S ribosomal protein L26-like Neighboring gene tyrosine-protein phosphatase non-receptor type 11-like Neighboring gene cytochrome P450 family 7 subfamily A member 1 Neighboring gene syndecan binding protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in membrane fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nuclear membrane reassembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UBX domain-containing protein 2B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044396.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    46851791..46890683
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030795077.1 → XP_030650937.1  UBX domain-containing protein 2B isoform X1

    Conserved Domains (2) summary
    cd17161
    Location:270 → 351
    UBX_UBXN2B; Ubiquitin regulatory domain X (UBX) found in UBX domain protein 2B (UBXN2B) and similar proteins
    pfam08059
    Location:146 → 220
    SEP; SEP domain

  2. XM_003256009.4 → XP_003256057.1  UBX domain-containing protein 2B isoform X2

    UniProtKB/TrEMBL
    A0A2I3HII3
    Related
    ENSNLEP00000001605.3, ENSNLET00000001697.4
    Conserved Domains (2) summary
    smart00553
    Location:140 → 232
    SEP; Domain present in Saccharomyces cerevisiae Shp1, Drosophila melanogaster eyes closed gene (eyc), and vertebrate p47
    cd17161
    Location:250 → 331
    UBX_UBXN2B; Ubiquitin regulatory domain X (UBX) found in UBX domain protein 2B (UBXN2B) and similar proteins

  3. XM_030795079.1 → XP_030650939.1  UBX domain-containing protein 2B isoform X3

    Related
    ENSNLEP00000029625.2, ENSNLET00000033652.2
    Conserved Domains (2) summary
    cd17161
    Location:247 → 328
    UBX_UBXN2B; Ubiquitin regulatory domain X (UBX) found in UBX domain protein 2B (UBXN2B) and similar proteins
    pfam08059
    Location:123 → 197
    SEP; SEP domain
Nucleotide Protein
Heading Accession and Version

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