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MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1 [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100604056, updated on 8-Mar-2024

Summary

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Gene symbol
MDGA1
Gene description
MAM domain containing glycosylphosphatidylinositol anchor 1
See related
EnsemblRapid:ENSNLEG00000011271
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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See MDGA1 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
17
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 17 NC_044397.1 (1264329..1329171, complement)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 17 NC_019832.1 (1267728..1331441, complement)

Chromosome 17 - NC_044397.1Genomic Context describing neighboring genes Neighboring gene putative uncharacterized protein FLJ45825 Neighboring gene uncharacterized LOC115830975 Neighboring gene zinc finger AN1-type containing 3 Neighboring gene U1 spliceosomal RNA Neighboring gene small nucleolar RNA SNORD45 Neighboring gene BTB domain containing 9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables axon guidance receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in homophilic cell adhesion via plasma membrane adhesion molecules IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synapse organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuronal cell body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
MAM domain-containing glycosylphosphatidylinositol anchor protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044397.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    1264329..1329171 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030796220.1 → XP_030652080.1  MAM domain-containing glycosylphosphatidylinositol anchor protein 1

    UniProtKB/TrEMBL
    G1RKG9
    Related
    ENSNLEP00000042421.2, ENSNLET00000034145.2
    Conserved Domains (4) summary
    smart00409
    Location:248 → 326
    IG; Immunoglobulin
    pfam00629
    Location:755 → 919
    MAM; MAM domain, meprin/A5/mu
    pfam13927
    Location:49 → 112
    Ig_3; Immunoglobulin domain
    cl11960
    Location:334 → 418
    Ig; Immunoglobulin domain
Nucleotide Protein
Heading Accession and Version

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