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VTCN1 V-set domain containing T cell activation inhibitor 1 [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100602199, updated on 8-Mar-2024

Summary

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Gene symbol
VTCN1
Gene description
V-set domain containing T cell activation inhibitor 1
See related
EnsemblRapid:ENSNLEG00000005256
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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See VTCN1 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
8
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 12 NC_044392.1 (58762363..58831205)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 12 NC_019827.1 (60468047..60537399)

Chromosome 12 - NC_044392.1Genomic Context describing neighboring genes Neighboring gene mannosidase alpha class 1A member 2 Neighboring gene uncharacterized LOC101178232 Neighboring gene 40S ribosomal protein S15a pseudogene Neighboring gene tripartite motif containing 45

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

General protein information

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Preferred Names
V-set domain-containing T-cell activation inhibitor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044392.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    58762363..58831205
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004089971.1 → XP_004090019.1  V-set domain-containing T-cell activation inhibitor 1 isoform X4

    See identical proteins and their annotated locations for XP_004090019.1

    UniProtKB/TrEMBL
    A0A2I3FR18
    Related
    ENSNLEP00000024626.1, ENSNLET00000042255.2

  2. XM_003268049.2 → XP_003268097.1  V-set domain-containing T-cell activation inhibitor 1 isoform X1

    UniProtKB/TrEMBL
    A0A2I3GRD9, G1QZJ5
    Related
    ENSNLEP00000006366.1, ENSNLET00000006691.3
    Conserved Domains (1) summary
    cd20984
    Location:38 → 147
    IgV_B7-H4; Immunoglobulin Variable (IgV) domain of B7-H4

  3. XM_004089970.2 → XP_004090018.1  V-set domain-containing T-cell activation inhibitor 1 isoform X3

    See identical proteins and their annotated locations for XP_004090018.1

    UniProtKB/TrEMBL
    G1QZJ7
    Conserved Domains (2) summary
    cd00096
    Location:5 → 9
    Ig; Ig strand D [structural motif]
    cl11960
    Location:1 → 52
    Ig; Immunoglobulin domain

  4. XM_004089969.1 → XP_004090017.1  V-set domain-containing T-cell activation inhibitor 1 isoform X3

    See identical proteins and their annotated locations for XP_004090017.1

    UniProtKB/TrEMBL
    G1QZJ7
    Conserved Domains (2) summary
    cd00096
    Location:5 → 9
    Ig; Ig strand D [structural motif]
    cl11960
    Location:1 → 52
    Ig; Immunoglobulin domain

  5. XM_004089968.3 → XP_004090016.1  V-set domain-containing T-cell activation inhibitor 1 isoform X2

    UniProtKB/TrEMBL
    A0A2I3GRD9
    Related
    ENSNLEP00000033874.1, ENSNLET00000041100.2
    Conserved Domains (1) summary
    cd20984
    Location:34 → 143
    IgV_B7-H4; Immunoglobulin Variable (IgV) domain of B7-H4
Nucleotide Protein
Heading Accession and Version

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