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ACER2 alkaline ceramidase 2 [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100600904, updated on 8-Mar-2024

Summary

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Gene symbol
ACER2
Gene description
alkaline ceramidase 2
See related
EnsemblRapid:ENSNLEG00000017530
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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See ACER2 in Genome Data Viewer
Location:
chromosome: 1a
Exon count:
6
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 1a NC_044381.1 (20132151..20176210)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 1a NC_019816.1 (20737116..20784246)

Chromosome 1a - NC_044381.1Genomic Context describing neighboring genes Neighboring gene NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like Neighboring gene ribosomal protein S6 Neighboring gene microtubule-associated proteins 1A/1B light chain 3B pseudogene Neighboring gene solute carrier family 24 member 2 Neighboring gene uncharacterized protein C11orf98-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alkaline ceramidase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044381.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    20132151..20176210
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003260380.3 → XP_003260428.1  alkaline ceramidase 2

    See identical proteins and their annotated locations for XP_003260428.1

    UniProtKB/TrEMBL
    G1S6Y4
    Related
    ENSNLEP00000021273.1, ENSNLET00000022353.3
    Conserved Domains (1) summary
    pfam05875
    Location:13 → 261
    Ceramidase

  2. XM_030819170.1 → XP_030675030.1  alkaline ceramidase 2

    UniProtKB/TrEMBL
    G1S6Y4
    Conserved Domains (1) summary
    pfam05875
    Location:13 → 261
    Ceramidase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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