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SLC3A1 solute carrier family 3 member 1 [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100600366, updated on 8-Mar-2024

Summary

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Gene symbol
SLC3A1
Gene description
solute carrier family 3 member 1
See related
EnsemblRapid:ENSNLEG00000016839
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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See SLC3A1 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
11
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 19 NC_044399.1 (42395544..42439651, complement)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 19 NC_019834.1 (45515346..45559387, complement)

Chromosome 19 - NC_044399.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101177998 Neighboring gene calmodulin-lysine N-methyltransferase Neighboring gene prolyl endopeptidase like Neighboring gene 60S ribosomal protein L12 pseudogene Neighboring gene small nucleolar RNA U13

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in amino acid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neutral and basic amino acid transport protein rBAT
Names
solute carrier family 3 (cystine, dibasic and neutral amino acid transporters, activator of cystine, dibasic and neutral amino acid transport), member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044399.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    42395544..42439651 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030800392.1 → XP_030656252.1  neutral and basic amino acid transport protein rBAT isoform X1

    UniProtKB/TrEMBL
    G1S4M1
    Related
    ENSNLEP00000020459.3, ENSNLET00000021475.3
    Conserved Domains (1) summary
    cd11359
    Location:116 → 569
    AmyAc_SLC3A1; Alpha amylase catalytic domain found in Solute Carrier family 3 member 1 proteins

  2. XM_030800393.1 → XP_030656253.1  neutral and basic amino acid transport protein rBAT isoform X2

    UniProtKB/TrEMBL
    G1S4M1
    Conserved Domains (1) summary
    cd11359
    Location:52 → 505
    AmyAc_SLC3A1; Alpha amylase catalytic domain found in Solute Carrier family 3 member 1 proteins

  3. XM_030800394.1 → XP_030656254.1  neutral and basic amino acid transport protein rBAT isoform X3

    UniProtKB/TrEMBL
    A0A2I3HTN9
    Related
    ENSNLEP00000046943.2, ENSNLET00000046751.2
    Conserved Domains (1) summary
    cd11359
    Location:116 → 539
    AmyAc_SLC3A1; Alpha amylase catalytic domain found in Solute Carrier family 3 member 1 proteins
Nucleotide Protein
Heading Accession and Version

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