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RNASEH2B ribonuclease H2 subunit B [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100599945, updated on 8-Mar-2024

Summary

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Gene symbol
RNASEH2B
Gene description
ribonuclease H2 subunit B
See related
EnsemblRapid:ENSNLEG00000003804
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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See RNASEH2B in Genome Data Viewer
Location:
chromosome: 5
Exon count:
15
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 5 NC_044385.1 (77092894..77156459)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 5 NC_019820.1 (78575312..78625232)

Chromosome 5 - NC_044385.1Genomic Context describing neighboring genes Neighboring gene leukemia-associated protein 1 Neighboring gene uncharacterized LOC115835194 Neighboring gene deleted in lymphocytic leukemia 7 Neighboring gene uncharacterized LOC105739855 Neighboring gene guanylate cyclase soluble subunit beta-2-like Neighboring gene chromosome 5 C13orf42 homolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in RNA catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribonucleotide metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribonuclease H2 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribonuclease H2 subunit B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044385.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    77092894..77156459
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030813423.1 → XP_030669283.1  ribonuclease H2 subunit B isoform X3

    UniProtKB/TrEMBL
    A0A2I3HGK8
    Related
    ENSNLEP00000060963.1, ENSNLET00000069400.1
    Conserved Domains (2) summary
    cd09270
    Location:17 → 184
    RNase_H2-B; Ribonuclease H2-B is a subunit of the eukaryotic RNase H complex which cleaves RNA-DNA hybrids
    pfam14994
    Location:216 → 279
    TSGA13; Testis-specific gene 13 protein

  2. XM_030813426.1 → XP_030669286.1  ribonuclease H2 subunit B isoform X6

    UniProtKB/TrEMBL
    A0A2I3HGK8
    Related
    ENSNLEP00000060005.1, ENSNLET00000067377.1
    Conserved Domains (1) summary
    cd09270
    Location:17 → 184
    RNase_H2-B; Ribonuclease H2-B is a subunit of the eukaryotic RNase H complex which cleaves RNA-DNA hybrids

  3. XM_030813421.1 → XP_030669281.1  ribonuclease H2 subunit B isoform X1

    UniProtKB/TrEMBL
    G1QUM6
    Related
    ENSNLEP00000004646.3, ENSNLET00000004885.4

  4. XM_030813422.1 → XP_030669282.1  ribonuclease H2 subunit B isoform X2

    UniProtKB/TrEMBL
    G1QUM6
    Related
    ENSNLEP00000058633.1, ENSNLET00000070358.1
    Conserved Domains (1) summary
    cd09270
    Location:23 → 287
    RNase_H2-B; Ribonuclease H2-B is a subunit of the eukaryotic RNase H complex which cleaves RNA-DNA hybrids

  5. XM_030813424.1 → XP_030669284.1  ribonuclease H2 subunit B isoform X4

    UniProtKB/TrEMBL
    G1QUM6
    Conserved Domains (1) summary
    cd09270
    Location:5 → 269
    RNase_H2-B; Ribonuclease H2-B is a subunit of the eukaryotic RNase H complex which cleaves RNA-DNA hybrids

  6. XM_030813425.1 → XP_030669285.1  ribonuclease H2 subunit B isoform X5

    UniProtKB/TrEMBL
    G1QUM6

RNA

  1. XR_004030179.1 RNA Sequence

    Related
    ENSNLET00000076543.1
Nucleotide Protein
Heading Accession and Version

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