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MGAT5 alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100597446, updated on 8-Mar-2024

Summary

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Gene symbol
MGAT5
Gene description
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase
See related
EnsemblRapid:ENSNLEG00000008354
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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See MGAT5 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
18
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 20 NC_044400.1 (17491586..17816725, complement)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 20 NC_019835.1 (17698259..18027940, complement)

Chromosome 20 - NC_044400.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105738909 Neighboring gene aminocarboxymuconate semialdehyde decarboxylase Neighboring gene transmembrane protein 163 Neighboring gene epididymal secretory protein E3-beta-like Neighboring gene NCK associated protein 5 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC105738908

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A
Names
mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044400.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    17491586..17816725 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012502528.2 → XP_012357982.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A isoform X1

    UniProtKB/TrEMBL
    G1RAF5
    Conserved Domains (2) summary
    pfam15024
    Location:172 → 726
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:7 → 138
    DUF4525; Domain of unknown function (DUF4525)

  2. XM_030800826.1 → XP_030656686.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A isoform X1

    UniProtKB/TrEMBL
    G1RAF5
    Conserved Domains (2) summary
    pfam15024
    Location:172 → 726
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:7 → 138
    DUF4525; Domain of unknown function (DUF4525)

  3. XM_030800827.1 → XP_030656687.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A isoform X1

    UniProtKB/TrEMBL
    G1RAF5
    Conserved Domains (2) summary
    pfam15024
    Location:172 → 726
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:7 → 138
    DUF4525; Domain of unknown function (DUF4525)

  4. XM_030800828.1 → XP_030656688.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A isoform X2

  5. XM_030800825.1 → XP_030656685.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A isoform X1

    UniProtKB/TrEMBL
    G1RAF5
    Related
    ENSNLEP00000010202.3, ENSNLET00000010702.4
    Conserved Domains (2) summary
    pfam15024
    Location:172 → 726
    Glyco_transf_18; Glycosyltransferase family 18
    pfam15027
    Location:7 → 138
    DUF4525; Domain of unknown function (DUF4525)
Nucleotide Protein
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